<HTML><BODY style="word-wrap: break-word; -khtml-nbsp-mode: space; -khtml-line-break: after-white-space; ">Ilya-<DIV>Thanks for the help. Changing the apache user to www in the httpd.conf did the trick. I haven't compiled apache or anything strange, although I have allowed a colleague to modify the httpd.conf file a while ago. I asked him to restore it the original, but apparently he replaced it with a non standard Mac version.</DIV><DIV>Thanks again for your help-</DIV><DIV>Steve</DIV><DIV><BR class="khtml-block-placeholder"><DIV><SPAN class="Apple-style-span" style="border-collapse: separate; border-spacing: 0px 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: auto; -khtml-text-decorations-in-effect: none; text-indent: 0px; -apple-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><SPAN class="Apple-style-span" style="border-collapse: separate; border-spacing: 0px 0px; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: auto; -khtml-text-decorations-in-effect: none; text-indent: 0px; -apple-text-size-adjust: auto; text-transform: none; orphans: 2; white-space: normal; widows: 2; word-spacing: 0px; "><DIV>61 Biopolis Drive (Proteos)</DIV><DIV>Singapore 138673</DIV><DIV>+65 65869844 office</DIV><DIV>+65 65869841lab</DIV><DIV><A href="mailto:stephen@cmm.a-star.edu.sg">stephen@cmm.a-star.edu.sg</A></DIV><DIV><BR class="khtml-block-placeholder"></DIV><BR class="Apple-interchange-newline"></SPAN></SPAN> </DIV><BR><DIV><DIV>On 07 Sep 2006, at 1:38 AM, Ilya Goldberg wrote:</DIV><BR class="Apple-interchange-newline"><BLOCKQUOTE type="cite"><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Hi Steve</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Wow, that's a doozie.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">OMEIS cannot be reached because the wrong user owns the files.<SPAN class="Apple-converted-space"> </SPAN>The user that's running the apache process must own (recursively) all the files in /OME/OMEIS.<SPAN class="Apple-converted-space"> </SPAN>The permissions are restrictive enough that the owner really must be right.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">A couple of things make me think that this isn't your average run of the mill OS X installation.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">The apache user has been 'www' on OS X seemingly forever.<SPAN class="Apple-converted-space"> </SPAN>Did you compile Apache yourself?</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">We haven't had problems with creating users/groups on OS X in a very long time (years?).</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">If you're very lucky, you might be able to modify your Apache configuration file and change:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "># User nobody</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">User www</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">(comment out the User nobody line, and insert the User www line).</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">The configuration file is /etc/httpd/httpd.conf.<SPAN class="Apple-converted-space"> </SPAN>If you installed apache yourself, then all bets are off - you have to figure out where the apache conf file went.<SPAN class="Apple-converted-space"> </SPAN>You may still have /etc/httpd/httpd.conf, but it may not be the "active" one, so changes there may have no effect.<SPAN class="Apple-converted-space"> </SPAN>About the only way to tell is to put a syntax error in the conf file on purpose, restart apache and make sure it fails.<SPAN class="Apple-converted-space"> </SPAN>This is just a glimpse of the world of hurt that normally ensues when replacing core components of the stock OS.<SPAN class="Apple-converted-space"> </SPAN>If it were me, I would take the 30 minutes and reinstall the OS because the chances of diagnosing and fixing this in less time are pretty nil.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">The user/group thing is a complete mystery.<SPAN class="Apple-converted-space"> </SPAN>Haven't ever seen that before, and we've used every version of OS X pretty extensively.<SPAN class="Apple-converted-space"> </SPAN>Is your computer "bound" to an external authentication service (like ldap/active directory)?</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">-Ilya</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">On Sep 6, 2006, at 2:59 AM, Stephen Ogg wrote:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV> <BLOCKQUOTE type="cite"><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Dear OME team-</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">I have tried installing ome on my powerbook G4 (sorry no intel chip) and have failed. I include the OME-install.log for any help you could give me.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">It seems to fail because the omeis script tries to change directories to /OME/OMEIS and fails with some permission problems. I include the terminal ouput from a number of commands to outline what I think has gone wrong (see below).<SPAN class="Apple-converted-space"> </SPAN>Additionally, the first time I tried the installation, I got some errors in the log about users (specifically "ome" and "steve") not able to be added to the "ome" group. It told me to fix this in the /etc/group file before continuing. Knowing just enough to be dangerous, I added those two users to the ome group in the / domain using the netinfo manager and didn't change the files as suggested in the install log.<SPAN class="Apple-converted-space"> </SPAN>During my next attempt at installation, the error of manually adding users to the ome group was gone, but the install failed at the same point. <SPAN class="Apple-converted-space"> </SPAN>I think the problem is the following:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">=======================portion of output from ps -aux========================</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">root <SPAN class="Apple-converted-space"> </SPAN>388 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.3<SPAN class="Apple-converted-space"> </SPAN>30020 <SPAN class="Apple-converted-space"> </SPAN>1668<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>Ss<SPAN class="Apple-converted-space"> </SPAN>2:17PM <SPAN class="Apple-converted-space"> </SPAN>0:00.19 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">ome <SPAN class="Apple-converted-space"> </SPAN>3468 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.6<SPAN class="Apple-converted-space"> </SPAN>39708 <SPAN class="Apple-converted-space"> </SPAN>3124<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>SNs <SPAN class="Apple-converted-space"> </SPAN>2:18PM <SPAN class="Apple-converted-space"> </SPAN>0:00.53 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/Metadata.framework/Versions/A/Support/mdimportserver</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">www <SPAN class="Apple-converted-space"> </SPAN>5912 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.5<SPAN class="Apple-converted-space"> </SPAN>40372 <SPAN class="Apple-converted-space"> </SPAN>2644<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>SNs <SPAN class="Apple-converted-space"> </SPAN>2:20PM <SPAN class="Apple-converted-space"> </SPAN>0:00.24 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/Metadata.framework/Versions/A/Support/mdimportserver</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">nobody<SPAN class="Apple-converted-space"> </SPAN>5916 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.5<SPAN class="Apple-converted-space"> </SPAN>28852 <SPAN class="Apple-converted-space"> </SPAN>2544<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>S <SPAN class="Apple-converted-space"> </SPAN>2:20PM <SPAN class="Apple-converted-space"> </SPAN>0:00.10 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">nobody<SPAN class="Apple-converted-space"> </SPAN>5917 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.2<SPAN class="Apple-converted-space"> </SPAN>28700<SPAN class="Apple-converted-space"> </SPAN>904<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>S <SPAN class="Apple-converted-space"> </SPAN>2:20PM <SPAN class="Apple-converted-space"> </SPAN>0:00.01 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">nobody<SPAN class="Apple-converted-space"> </SPAN>5918 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.2<SPAN class="Apple-converted-space"> </SPAN>28700<SPAN class="Apple-converted-space"> </SPAN>912<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>S <SPAN class="Apple-converted-space"> </SPAN>2:20PM <SPAN class="Apple-converted-space"> </SPAN>0:00.01 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">nobody<SPAN class="Apple-converted-space"> </SPAN>5919 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.2<SPAN class="Apple-converted-space"> </SPAN>28700<SPAN class="Apple-converted-space"> </SPAN>972<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>S <SPAN class="Apple-converted-space"> </SPAN>2:20PM <SPAN class="Apple-converted-space"> </SPAN>0:00.01 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">nobody<SPAN class="Apple-converted-space"> </SPAN>5920 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.1<SPAN class="Apple-converted-space"> </SPAN>28700<SPAN class="Apple-converted-space"> </SPAN>492<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>S <SPAN class="Apple-converted-space"> </SPAN>2:20PM <SPAN class="Apple-converted-space"> </SPAN>0:00.00 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">nobody<SPAN class="Apple-converted-space"> </SPAN>5924 <SPAN class="Apple-converted-space"> </SPAN>0.0<SPAN class="Apple-converted-space"> </SPAN>0.1<SPAN class="Apple-converted-space"> </SPAN>28700<SPAN class="Apple-converted-space"> </SPAN>596<SPAN class="Apple-converted-space"> </SPAN>??<SPAN class="Apple-converted-space"> </SPAN>S <SPAN class="Apple-converted-space"> </SPAN>2:21PM <SPAN class="Apple-converted-space"> </SPAN>0:00.00 /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">========================================================================================</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">"nobody" is the user on my machine who is running the webserver and yet only user "www" can enter the /OME/OMEIS directory--</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">============================= output form ls -ls</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">steve:/OME steve$ ls -ls</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">total 0</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>5 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>170 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:22 Inline</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxrwxr-x <SPAN class="Apple-converted-space"> </SPAN>11 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>374 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 JavaScript</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwx--S---<SPAN class="Apple-converted-space"> </SPAN>4 www<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>136 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 OMEIS</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-xr-x <SPAN class="Apple-converted-space"> </SPAN>21 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>714 Sep<SPAN class="Apple-converted-space"> </SPAN>6 14:19 bin</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>2 ome<SPAN class="Apple-converted-space"> </SPAN>ome <SPAN class="Apple-converted-space"> </SPAN>68 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 cgi</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxrwxr-x <SPAN class="Apple-converted-space"> </SPAN>22 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>748 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:22 conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>2 ome<SPAN class="Apple-converted-space"> </SPAN>ome <SPAN class="Apple-converted-space"> </SPAN>68 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 crontab</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxrwxr-x<SPAN class="Apple-converted-space"> </SPAN>6 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>204 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 html</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxrwxr-x <SPAN class="Apple-converted-space"> </SPAN>14 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>476 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 images</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>2 ome<SPAN class="Apple-converted-space"> </SPAN>ome <SPAN class="Apple-converted-space"> </SPAN>68 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 lib</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>2 ome<SPAN class="Apple-converted-space"> </SPAN>ome <SPAN class="Apple-converted-space"> </SPAN>68 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 matlab</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>3 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>102 Sep<SPAN class="Apple-converted-space"> </SPAN>6 14:20 perl2</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">0 drwxr-sr-x<SPAN class="Apple-converted-space"> </SPAN>4 ome<SPAN class="Apple-converted-space"> </SPAN>ome<SPAN class="Apple-converted-space"> </SPAN>136 Sep<SPAN class="Apple-converted-space"> </SPAN>6 11:20 xml</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">steve:/OME steve$</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">=============================================</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">That's I think why the following happens</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">================================contents of /var/tmp/OME/install/ApacheConfigTask.log==================</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">steve:/var/tmp/OME/install steve$ more ApacheConfigTask.log</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Apache setup</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Apache binary: /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">apachectl binary: /usr/sbin/apachectl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">httpd conf: /etc/httpd/httpd.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">httpd version: 1</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Apache configuration:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Configure Apache?: yes</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Developer configuration: no</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Server restart?: yes</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Install OME servers:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Images (omeis): yes</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Data (omeds): yes</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Web: yes</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Apache directories:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>httpd binary: /usr/sbin/httpd</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>apachectl binary: /usr/sbin/apachectl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>DocumentRoot: /Library/WebServer/Documents/OME</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>cgi-bin: /Library/WebServer/CGI-Executables</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Web-UI HTML Templates:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>Developer configuration: no</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Configuring Apache</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">httpd.conf is /etc/httpd/httpd.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Installing OMEIS</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Copying src/C/omeis/omeis to /Library/WebServer/CGI-Executables/omeis</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">chmod 0755 /Library/WebServer/CGI-Executables/omeis</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">chown /Library/WebServer/CGI-Executables/omeis to uid: 70 gid: 502</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Set APACHE_OMEIS_INCLUDE to Include /OME/conf/httpd.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Forking a process to upgrade OMEIS</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Installing OMEDS</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Set APACHE_OMEDS_INCLUDE to Include /OME/conf/httpd.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Installing WEB</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Copying src/perl2/serve.pl to /OME/perl2/serve.pl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">chmod 0755 /OME/perl2/serve.pl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">chown /OME/perl2/serve.pl to uid: 70 gid: 502</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Copying src/html/index.html to /Library/WebServer/Documents/OME/index.html</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">chmod 0755 /Library/WebServer/Documents/OME/index.html</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Set APACHE_WEB_INCLUDE to Include /OME/conf/httpd.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Installing OME-startup.pl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Copying src/perl2/OME-startup.pl to /OME/conf/OME-startup.pl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">chown /OME/conf/OME-startup.pl to uid: 70 gid: 502</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Fixing variables in conf/httpd.ome.*.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Replacing %OME_DIST_BASE with /private/var/tmp/OME/install/OME</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Replacing %OME_INSTALL_BASE with /OME</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.ome.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.ome.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.omeds-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.omeds-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.omeis-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.omeis-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.web-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.web-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd1.99.omeds-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd1.99.omeds-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd1.99.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd1.99.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd1.99.omeis-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd1.99.omeis-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd1.99.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd1.99.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd1.99.web-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd1.99.web-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd1.99.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd1.99.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd2.omeds-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd2.omeds-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd2.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd2.omeds.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd2.omeis-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd2.omeis-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd2.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd2.omeis.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd2.web-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd2.web-dev.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd2.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd2.<A href="http://web.conf">web.conf</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Reading /OME/conf/httpd.ome.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing /OME/conf/httpd.ome.conf</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Restarting Apache</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Executing /usr/sbin/apachectl restart</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Getting an OME::Util::cURL user agent</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Generated mod_perl test script:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">#!/usr/bin/perl -w</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">use strict;</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">use CGI qw/-no_xhtml/;</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">my $CGI = CGI->new();</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">print $CGI->header(-type => 'text/plain'),</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">my ($key,$value);</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">while ( ($key, $value) = each %ENV)</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">{</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><SPAN class="Apple-converted-space"> </SPAN>print "$key = $value\n";</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">}</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">1;</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Writing script to /OME/perl2/mod_perl_test.pl</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Getting response from <A href="http://localhost/perl2/mod_perl_test.pl">http://localhost/perl2/mod_perl_test.pl</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Checking response from <A href="http://localhost/perl2/mod_perl_test.pl">http://localhost/perl2/mod_perl_test.pl</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Parsing response from <A href="http://localhost/perl2/mod_perl_test.pl">http://localhost/perl2/mod_perl_test.pl</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">mod_perl is configured correctly</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Testing omeis installation</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Getting an OME::Util::cURL user agent</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Getting response from <A href="http://localhost/cgi-bin/omeis">http://localhost/cgi-bin/omeis</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Parsing response from <A href="http://localhost/cgi-bin/omeis">http://localhost/cgi-bin/omeis</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">OMEIS could not be reached.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Incorrect response from OMEIS at <A href="http://localhost/cgi-bin/omeis">http://localhost/cgi-bin/omeis</A>:</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Error calling Initialization: Could not change working directory to /OME/OMEIS: Permission denied</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">System Error: Permission denied</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">==================================================================================</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">All of this is just conjecture though, As I'm a lowly biologist, I could be way off base.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Any help would be appreciated.</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Thanks in advance</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Steve</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><A href="mailto:stephen@cmm.a-star.edu.sg">stephen@cmm.a-star.edu.sg</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">_______________________________________________</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">ome-users mailing list</DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><A href="mailto:ome-users@lists.openmicroscopy.org.uk">ome-users@lists.openmicroscopy.org.uk</A></DIV><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><A href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</A></DIV> </BLOCKQUOTE><DIV style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><BR></DIV> </BLOCKQUOTE></DIV><BR></DIV></BODY></HTML>