[ome-users] ome-users Digest, Vol 54, Issue 11

Mike Stout michael.stout at nottingham.ac.uk
Fri Oct 16 12:09:41 BST 2009


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> Today's Topics:
>
>    1. Update: Progress towards OMERO 4.1 (Jason Swedlow)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Tue, 22 Sep 2009 00:23:17 +0100
> From: Jason Swedlow <jason at lifesci.dundee.ac.uk>
> To: OME-Users OME-Users <ome-users at lists.openmicroscopy.org.uk>,	OME
> 	Development <ome-devel at lists.openmicroscopy.org.uk>
> Subject: [ome-users] Update: Progress towards OMERO 4.1
> Message-ID:
> 	<6105BA06-3DCD-4DFA-8781-8DE156FEEF1E at lifesci.dundee.ac.uk>
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> Dear All-
>
> Just a short heads up on our status moving towards our 4.1 releases.   
> We'll be releasing updates to the OME Data Model, Bio-Formats, and  
> OMERO.   A summary of what's happening:
>
> -- we are on schedule for release on Oct 15.  We'll let you know if we  
> need to extend this deadline.
>
> --  OME-XML:  alot of cleaning, simplification.  See http://ome-xml.org/milestone/September%202009%20Schema%20Release
>
> -- Bio-Formats:  
> ---> New HCS formats
> ---> substantial improvements in metadata support, especially for  
> confocal microscopy
> ---> new metadata testing and validation system
> --->  See http://skyking.microscopy.wisc.edu/trac/java/milestone/bio-formats-4.1
>
> -- OMERO:
>   ---> import of all formats supported by Bio-Formats into OMERO
> ---> Acceleration of import through more efficient calls
> ---> Support for HCS data in OMERO.insight (will be followed with  
> support in OMERO.web shortly)
> ---> Improved support for confocal data in OMERO.insight
> ---> A new OMERO system-- OMERO.qa.  A system that allows uploads of  
> problematic data files to our servers, and lets users follow our  
> testing and work on these files.
> ---> Export to OME-TIFF
> ---> Expansion of functionality in OMERO Dropbox-- new files  and  
> support across all major OS's.
> --->  Switch OMERO.insight to use OpenGL to fix Java memory leaks
> ---> Lots of updates to all OMERO clients, improving UI, workflow, and  
> usability
> -- For more info see:
>
> http://trac.openmicroscopy.org.uk/omero/milestone/OMERO-Beta4.1
> http://trac.openmicroscopy.org.uk/shoola/milestone/OMERO-Beta4.1
>
> The priorities for this release were set following our users meeting  
> held in May at Institut Pasteur.  We have stayed true to the demand to  
> improve data in and out, while trying to also advance new  
> functionality, especially for HCS.
>
> There is a huge amount of work "under the hood" that lays the  
> groundwork for major changes in functionality over the next few  
> months.  We'll announce more details in upcoming emails.
>
> We'll provide further updates as we get closer to the release date.
>
> Cheers,
>
> Jason
>
>
> **************************
> Wellcome Trust Centre for Gene Regulation & Expression
> College of Life Sciences
> MSI/WTB/JBC Complex
> University of Dundee
> Dow Street
> Dundee  DD1 5EH
> United Kingdom
>
> phone (01382) 385819
> Intl phone:  44 1382 385819
> FAX   (01382) 388072
> email: jason at lifesci.dundee.ac.uk
>
> Lab Page: http://www.dundee.ac.uk/lifesciences/swedlow/
> Open Microscopy Environment: http://openmicroscopy.org
> **************************
>
> The University of Dundee is a Scottish Registered Charity, No. SC015096.
>
>
>
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> End of ome-users Digest, Vol 54, Issue 11
> *****************************************
>   
Any news on the OMERO 4.1 release -- scheduled for 15th October?

Cheers,
Mike

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