[ome-users] Omero Blitz error

Paulo Almeida palmeida at igc.gulbenkian.pt
Tue Feb 17 11:58:41 GMT 2009


Hi,

We are trying to install Omero/Omero Blitz and we get a java error when
running:

java -Xms512m -Xmx1512m -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode
-XX:+PrintGCDetails -XX:+PrintGCTimeStamps omero

We tried just "java omero" first, the switches were for debugging. We also
used -XX:-UseGCOverheadLimit , but it gave the same error. The computer
still had a lot of memory available.

The stack trace follows:

-----------
The system is out of resources.
Consult the following stack trace for details.
java.lang.OutOfMemoryError: GC overhead limit exceeded
        at
com.sun.tools.javac.code.Scope$ImportScope.makeEntry(Scope.java:385)
        at com.sun.tools.javac.code.Scope.enter(Scope.java:196)
        at
com.sun.tools.javac.comp.MemberEnter$2.importFrom(MemberEnter.java:198)
        at
com.sun.tools.javac.comp.MemberEnter$2.enterAnnotation(MemberEnter.java:203)
        at com.sun.tools.javac.comp.Annotate.flush(Annotate.java:95)
        at com.sun.tools.javac.comp.Annotate.enterDone(Annotate.java:87)
        at com.sun.tools.javac.comp.Enter.complete(Enter.java:472)
        at com.sun.tools.javac.comp.Enter.main(Enter.java:429)
        at
com.sun.tools.javac.main.JavaCompiler.enterTrees(JavaCompiler.java:819)
        at
com.sun.tools.javac.main.JavaCompiler.compile(JavaCompiler.java:727)
        at com.sun.tools.javac.main.Main.compile(Main.java:353)
        at com.sun.tools.javac.main.Main.compile(Main.java:279)
        at com.sun.tools.javac.main.Main.compile(Main.java:270)
        at com.sun.tools.javac.Main.compile(Main.java:69)
        at com.sun.tools.javac.Main.main(Main.java:54)

BUILD FAILED
/home/cgl/OMERO_test/OMERO_blitz/build.xml:108: The following error
occurred while executing this line:
/home/cgl/OMERO_test/OMERO_blitz/components/antlib/resources/global.xml:74:
The following error occurred while executing this line:
/home/cgl/OMERO_test/OMERO_blitz/components/blitz/build.xml:25: The
following error occurred while executing this line:
/home/cgl/OMERO_test/OMERO_blitz/components/antlib/resources/lifecycle.xml:122:
Compile failed; see the compiler error output for details.

Total time: 2 minutes 48 seconds
Heap
 par new generation   total 38336K, used 13664K [0x00007f5c5b4f0000,
0x00007f5c5de80000, 0x00007f5c5de80000)
  eden space 34112K,  34% used [0x00007f5c5b4f0000, 0x00007f5c5c080cc0,
0x00007f5c5d640000)
  from space 4224K,  43% used [0x00007f5c5da60000, 0x00007f5c5dc27638,
0x00007f5c5de80000)
  to   space 4224K,   0% used [0x00007f5c5d640000, 0x00007f5c5d640000,
0x00007f5c5da60000)
 concurrent mark-sweep generation total 481728K, used 12149K
[0x00007f5c5de80000, 0x00007f5c7b4f0000, 0x00007f5cb9cf0000)
 concurrent-mark-sweep perm gen total 63544K, used 38348K
[0x00007f5cb9cf0000, 0x00007f5cbdafe000, 0x00007f5cbf0f0000)

Thanks,
Paulo





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