Bio-Formats Plugins configuration - 2019-06-05 16:21:39 -- System properties -- ij.dir = C:\MISC_P~1\Fiji.app java.runtime.name = Java(TM) SE Runtime Environment fiji.dir = C:\MISC_P~1\Fiji.app imagej.dir = C:\MISC_P~1\Fiji.app sun.boot.library.path = C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\bin java.vm.version = 25.172-b11 fiji.defaultLibPath = bin/server/jvm.dll java.vm.vendor = Oracle Corporation java.vendor.url = http://java.oracle.com/ path.separator = ; java.vm.name = Java HotSpot(TM) 64-Bit Server VM file.encoding.pkg = sun.io user.country = US user.script = sun.os.patch.level = java.vm.specification.name = Java Virtual Machine Specification user.dir = C:\misc_programs\Fiji.app java.runtime.version = 1.8.0_172-b11 scijava.context.strict = false java.awt.graphicsenv = sun.awt.Win32GraphicsEnvironment java.endorsed.dirs = C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\endorsed os.arch = amd64 java.io.tmpdir = C:\Users\ICI\AppData\Local\Temp\ line.separator = java.vm.specification.vendor = Oracle Corporation user.variant = os.name = Windows 10 sun.jnu.encoding = Cp1252 java.library.path = C:\MISC_P~1\Fiji.app/lib/win64;C:\MISC_P~1\Fiji.app/mm/win64 sun.awt.enableExtraMouseButtons = true java.specification.name = Java Platform API Specification java.class.version = 52.0 sun.management.compiler = HotSpot 64-Bit Tiered Compilers os.version = 10.0 user.home = C:\Users\ICI user.timezone = America/New_York java.awt.printerjob = sun.awt.windows.WPrinterJob file.encoding = Cp1252 java.specification.version = 1.8 plugins.dir = C:\MISC_P~1\Fiji.app java.class.path = C:\MISC_P~1\Fiji.app/jars/imagej-launcher-4.0.5.jar user.name = ICI java.vm.specification.version = 1.8 java.home = C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre sun.arch.data.model = 64 user.language = en java.specification.vendor = Oracle Corporation awt.toolkit = sun.awt.windows.WToolkit java.vm.info = mixed mode java.version = 1.8.0_172 java.ext.dirs = C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\ext;C:\WINDOWS\Sun\Java\lib\ext sun.boot.class.path = C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\resources.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\rt.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\sunrsasign.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\jsse.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\jce.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\charsets.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\jfr.jar;C:\MISC_P~1\Fiji.app\java\win64\jdk1.8.0_172\jre\classes java.vendor = Oracle Corporation ij.executable = C:\misc_programs\Fiji.app\ImageJ-win64.exe python.cachedir.skip = true file.separator = \ java.vendor.url.bug = http://bugreport.sun.com/bugreport/ sun.io.unicode.encoding = UnicodeLittle sun.cpu.endian = little sun.desktop = windows fiji.executable = C:\misc_programs\Fiji.app\ImageJ-win64.exe sun.cpu.isalist = amd64 -- Formats -- Successfully queried FilePattern reader. Successfully queried Zip reader. Successfully queried APNG reader. Successfully queried JPEG reader. Successfully queried PGM reader. Successfully queried Fits reader. Successfully queried PCX reader. Successfully queried GIF reader. Successfully queried BMP reader. Successfully queried IPLab reader. Successfully queried Ivision reader. Successfully queried Deltavision reader. Successfully queried MRC reader. Successfully queried Gatan reader. Successfully queried GatanDM2 reader. Successfully queried Imaris reader. Successfully queried OpenlabRaw reader. Successfully queried OMEXML reader. Successfully queried LIF reader. Initialized extra widgets for LIF reader. Successfully queried AVI reader. Successfully queried Pict reader. Initialized extra widgets for Pict reader. Successfully queried SDT reader. Initialized extra widgets for SDT reader. Successfully queried SPC reader. Successfully queried EPS reader. Successfully queried Slidebook reader. Successfully queried Alicona reader. Successfully queried MNG reader. Successfully queried Khoros reader. Successfully queried Visitech reader. Successfully queried LIM reader. Successfully queried PSD reader. Successfully queried InCell reader. Successfully queried L2D reader. Successfully queried FEI reader. Successfully queried NAF reader. Successfully queried MINC reader. Successfully queried QT reader. Initialized extra widgets for QT reader. Successfully queried MRW reader. Successfully queried TillVision reader. Successfully queried ARF reader. Successfully queried Cellomics reader. Successfully queried LiFlim reader. Successfully queried Targa reader. Successfully queried OxfordInstruments reader. Successfully queried VGSAM reader. Successfully queried HIS reader. Successfully queried WATOP reader. Successfully queried Seiko reader. Successfully queried Topometrix reader. Successfully queried UBM reader. Successfully queried Quesant reader. Successfully queried BioRadGel reader. Successfully queried RHK reader. Successfully queried MolecularImaging reader. Successfully queried CellWorx reader. Successfully queried Ecat7 reader. Successfully queried VarianFDF reader. Successfully queried AIM reader. Successfully queried InCell3000 reader. Successfully queried Spider reader. Successfully queried Volocity reader. Successfully queried Imagic reader. Successfully queried HamamatsuVMS reader. Successfully queried CellSens reader. Initialized extra widgets for CellSens reader. Successfully queried INR reader. Successfully queried Kodak reader. Successfully queried VolocityClipping reader. Successfully queried ZeissCZI reader. Initialized extra widgets for ZeissCZI reader. Successfully queried SIF reader. Successfully queried NDPIS reader. Successfully queried Povray reader. Successfully queried IMOD reader. Successfully queried Fake reader. Successfully queried AFI reader. Successfully queried Imspector reader. Successfully queried BioRadSCN reader. Successfully queried ZeissLMS reader. Successfully queried PQBin reader. Successfully queried FlowSight reader. Successfully queried IM3 reader. Successfully queried I2I reader. Successfully queried SPE reader. Successfully queried OIR reader. Successfully queried KLB reader. Successfully queried MicroCT reader. Successfully queried JEOL reader. Successfully queried Nifti reader. Successfully queried Analyze reader. Successfully queried APL reader. Successfully queried NRRD reader. Successfully queried ICS reader. Successfully queried PerkinElmer reader. Successfully queried Amira reader. Successfully queried Scanr reader. Successfully queried BD reader. Successfully queried Unisoku reader. Successfully queried PDS reader. Successfully queried Fuji reader. Successfully queried Operetta reader. Successfully queried Inveon reader. Successfully queried CellVoyager reader. Successfully queried Columbus reader. Successfully queried CV7000 reader. Successfully queried BioRad reader. Successfully queried FV1000 reader. Successfully queried ZeissZVI reader. Successfully queried IPW reader. Successfully queried JPEG2000 reader. Successfully queried JPX reader. Successfully queried ND2 reader. Initialized extra widgets for ND2 reader. Successfully queried PCI reader. Successfully queried ImarisHDF reader. Successfully queried CellH5 reader. Successfully queried Wlz reader. Successfully queried Veeco reader. Successfully queried ZeissLSM reader. Successfully queried SEQ reader. Successfully queried Gel reader. Successfully queried ImarisTiff reader. Successfully queried Flex reader. Error constructing widgets for Flex reader: java.lang.RuntimeException: Unable to instantiate service for interface loci.formats.services.LuraWaveService at loci.plugins.config.FlexWidgets.(FlexWidgets.java:66) at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) at java.lang.reflect.Constructor.newInstance(Constructor.java:423) at java.lang.Class.newInstance(Class.java:442) at loci.plugins.config.FormatEntry.(FormatEntry.java:75) at loci.plugins.config.ConfigWindow.run(ConfigWindow.java:357) at java.lang.Thread.run(Thread.java:748) Caused by: Unable to instantiate service for interface loci.formats.services.LuraWaveService at loci.common.services.ServiceFactory.getInstance(ServiceFactory.java:202) at loci.plugins.config.FlexWidgets.(FlexWidgets.java:63) ... 8 more Caused by: java.lang.reflect.InvocationTargetException at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) at java.lang.reflect.Constructor.newInstance(Constructor.java:423) at loci.common.services.ServiceFactory.getInstance(ServiceFactory.java:200) ... 9 more Caused by: java.lang.NoClassDefFoundError: com/luratech/lwf/lwfDecoder at loci.formats.services.LuraWaveServiceImpl.(LuraWaveServiceImpl.java:82) ... 14 more Caused by: java.lang.ClassNotFoundException: com.luratech.lwf.lwfDecoder at java.net.URLClassLoader.findClass(URLClassLoader.java:381) at java.lang.ClassLoader.loadClass(ClassLoader.java:424) at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349) at java.lang.ClassLoader.loadClass(ClassLoader.java:357) ... 15 more Successfully queried SVS reader. Successfully queried Imacon reader. Successfully queried LEO reader. Successfully queried JPK reader. Successfully queried NDPI reader. Successfully queried PCORAW reader. Successfully queried OMETiff reader. Successfully queried PyramidTiff reader. Successfully queried MIAS reader. Successfully queried TCS reader. Successfully queried Leica reader. Successfully queried Nikon reader. Successfully queried Fluoview reader. Successfully queried Prairie reader. Successfully queried Metamorph reader. Successfully queried Micromanager reader. Successfully queried ImprovisionTiff reader. Successfully queried MetamorphTiff reader. Successfully queried NikonTiff reader. Successfully queried PhotoshopTiff reader. Successfully queried FEITiff reader. Successfully queried SimplePCITiff reader. Successfully queried NikonElementsTiff reader. Successfully queried Trestle reader. Successfully queried SIS reader. Successfully queried DNG reader. Successfully queried ZeissTIFF reader. Successfully queried LeicaSCN reader. Successfully queried Vectra reader. Successfully queried SlidebookTiff reader. Successfully queried IonpathMIBITiff reader. Successfully queried TiffDelegate reader. Initialized extra widgets for TiffDelegate reader. Successfully queried Text reader. Successfully queried Burleigh reader. Successfully queried Openlab reader. Successfully queried Dicom reader. Successfully queried SMCamera reader. Successfully queried SBIG reader. Successfully queried HRDGDF reader. Successfully queried Hitachi reader. Successfully queried Bruker reader. Successfully queried CanonRaw reader. Successfully queried OBF reader. Successfully queried BDV reader. -- Libraries -- Found library Java: Version = 1.8.0_172 (Oracle Corporation) Path = C:\misc_programs\Fiji.app\java\win64\jdk1.8.0_172\jre\lib\rt.jar Found library ImageJ: Version = 1.52n (NIH) Path = C:\MISC_P~1\Fiji.app\jars\ij-1.52n.jar No library Java3D. Found library Jython: Version = 2.7.1 (SciJava) Path = C:\MISC_P~1\Fiji.app\jars\jython-shaded-2.7.1.jar No library MATLAB. No library QuickTime for Java. No library JAI Image I/O Tools - native codecs. No library Nikon ND2 plugin. Found library Bio-Formats plugins: Version = 29 May 2019 Path = C:\MISC_P~1\Fiji.app\plugins\bio-formats_plugins-6.1.1-20190604.111813-6.jar No library OME plugins. No library Image5D. Found library View5D: Version = 1.3.2 (Fiji) Path = C:\MISC_P~1\Fiji.app\plugins\View5D_-1.3.2.jar Found library Bio-Formats: Version = 29 May 2019 Path = C:\MISC_P~1\Fiji.app\jars\bio-formats\formats-api-6.1.1-20190529.101756-3.jar No library OME I/O. No library VisBio. Found library Java Advanced Imaging: Version = 1.1.3 (Sun Microsystems, Inc.) Path = C:\MISC_P~1\Fiji.app\jars\jai-core-1.1.3.jar No library JAI Image I/O Tools - Java wrapper. Found library JAI Image I/O Tools - Java codecs: Version = 0.1.0 (Open Microscopy Environment) Path = C:\MISC_P~1\Fiji.app\jars\bio-formats\ome-jai-0.1.0.jar Found library MDB Tools (Java port): Version = 5.3.2 (Open Microscopy Environment) Path = C:\MISC_P~1\Fiji.app\jars\bio-formats\ome-mdbtools-5.3.2.jar Found library NetCDF Java: Version = 4.3.22 (UCAR/Unidata) Path = C:\MISC_P~1\Fiji.app\jars\netcdf-4.3.22.jar Found library Apache Jakarta POI (OME version): Version = 5.3.3 (Open Microscopy Environment) Path = C:\MISC_P~1\Fiji.app\jars\bio-formats\ome-poi-5.3.3.jar Found library Simple Logging Facade for Java: Version = 1.7.25 Path = C:\MISC_P~1\Fiji.app\jars\slf4j-api-1.7.25.jar Found library OME-XML Java library: Version = 6.0.1 (Open Microscopy Environment) Path = C:\MISC_P~1\Fiji.app\jars\bio-formats\ome-xml-6.0.1.jar No library OME-Java API. No library Apache Jakarta Commons HttpClient. Found library Apache Jakarta Commons Logging: Version = 1.2 (The Apache Software Foundation) Path = C:\MISC_P~1\Fiji.app\jars\commons-logging-1.2.jar No library Apache XML-RPC. No library OMERO Common. No library OMERO Client. No library OMERO Data Model. No library OMERO Importer. No library Spring. No library JBoss Client. Found library JGoodies Forms: Version = 1.7.2 2013-11-13 09:48:14 (JGoodies Software GmbH) Path = C:\MISC_P~1\Fiji.app\jars\jgoodies-forms-1.7.2.jar No library OME Notes.