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<div>Hi Romain</div>
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<div>Attached is a little Matlab script to create a FLIM OME-TIFF.</div>
<div>The first section just creates some dummy data.</div>
<div>The second part (after the tic at line 28) uses the bio-formats Matlab plugin to write this to a file.</div>
<div>Note that the variable “delays’ can contain any strings not just the regularly spaced ones used here.</div>
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<div>This is quite old code now so maybe someone from the core OME team could have a quick look and see if it’s still ok?</div>
<div>In particular this line:</div>
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<div class="" style="margin:0px; font-size:11px; line-height:normal; font-family:Menlo; color:rgb(39,42,216)">
<span class="" style="font-size:13px; line-height:normal; color:rgb(0,0,0)">java.lang.System.setProperty(</span><span class="" style="">'javax.xml.transform.TransformerFactory'</span><span class="" style="font-size:13px; line-height:normal; color:rgb(0,0,0)">,
</span><span class="" style="">'com.sun.org.apache.xalan.internal.xsltc.trax.TransformerFactoryImpl’</span><span class="" style="font-size:13px; line-height:normal; color:rgb(0,0,0)">);</span></div>
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<span class="" style="font-size:13px; line-height:normal; color:rgb(0,0,0)"><br class="">
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<div class="" style="margin:0px; line-height:normal">may no longer be required.</div>
<div class="" style="margin:0px; line-height:normal">Also we used to have problems when overwriting existing files. If this has since been addressed,</div>
<div class="" style="margin:0px; line-height:normal">then this section:</div>
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<div class="" style="font-family:Menlo; margin:0px; line-height:normal"><span class="" style="font-size:11px; line-height:normal; color:rgb(187,44,162)">if</span><span class="" style=""> exist(outputPath,
</span><span class="" style="font-size:11px; line-height:normal; color:rgb(39,42,216)">'file'</span><span class="" style="">) ==
</span><span class="" style="font-size:11px; line-height:normal; color:rgb(39,42,216)">2</span></div>
<div class="" style="font-family:Menlo; margin:0px; line-height:normal"><span class="" style=""> delete(outputPath);</span></div>
<div class="" style="font-family:Menlo; margin:0px; line-height:normal"><span class="" style="">end</span></div>
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<div class="" style="margin:0px; line-height:normal"><span class="" style="">May no longer be required.</span></div>
<div class="" style="margin:0px; line-height:normal"><span class="" style="">Hope that helps.</span></div>
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<div class="" style="margin:0px; line-height:normal"><span class="" style="">Best wishes.</span></div>
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<div class="" style="margin:0px; line-height:normal"><span class="" style="">Ian</span></div>
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<div class="">On 17 Jul 2018, at 12:38, Laine, Romain <<a href="mailto:r.laine@ucl.ac.uk" class="">r.laine@ucl.ac.uk</a>> wrote:</div>
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Hi Ian,</div>
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Many thanks.</div>
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Code example would be great, please !</div>
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I am currently using MATLAB, is this a limitation?</div>
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Cheers,</div>
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Romain</div>
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