<p style="margin-top: 0px; margin-bottom: 0px; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols; font-size: 16px;">Hi,</p><p style="margin-top: 0px; margin-bottom: 0px; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols; font-size: 16px;"><br /></p><p style="margin-top: 0px; margin-bottom: 0px; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols; font-size: 16px;"> I am developing a tool in Java using loci-tools.jar 5.8.1. Here you can see an extract of the code: <a href="https://shrib.com/#RjFIQ2X6UyqkAvv-eyCl" class="OWAAutoLink" id="LPlnk238896" previewremoved="true">https://shrib.com/#RjFIQ2X6UyqkAvv-eyCl</a></p><p style="margin-top: 0px; margin-bottom: 0px; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols; font-size: 16px;">The idea of the code is to extract the videos from the .lif project, which only have black and white 16bit videos. I extract all the tiffs from all the videos and then I join them with ffmpeg. So at the end, if a video has 300 frames, I will have 300 tiffs images, 1 image per frame. If the .lif project is <4GB everything works. If the .lif project, for example, is 10 or 17 GB, the extraction runs but the images are wrong. Here you can see an example: <a href="http://i68.tinypic.com/63ujgw.png" class="OWAAutoLink" id="LPlnk173840" previewremoved="true">http://i68.tinypic.com/63ujgw.png</a> On your left, frame 1 series 0. On your rigth, frame 2 series 0. Time between images is 40ms so I suspect the tiny white particle on top of frame 1 is the same as the one down in frame 2. Videos inside both cases (4GB and 10GB) weight around 600 MB. If I remove the last videos of the 10 or 17 GB .lif project so I save it in a new .lif project that weitgths less than 4 GB, the conversion is done without problems. Btw, ffmpeg is giving me an error of "Error in tiff header" with those "wrong images" but I can open them with ImageJ and the result is what you saw in the previous images.</p><p style="margin-top: 0px; margin-bottom: 0px; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols; font-size: 16px;"><br /></p><p style="margin-top: 0px; margin-bottom: 0px; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols; font-size: 16px;">What is the problem here?</p>
<br /><br />