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Hi Neil,</div>
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for recent SlideBook files, a native reader is developed and maintained</div>
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by 3i [1] which is recognized by Bio-Formats.</div>
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In Fiji, 3i also maintains a dedicated update site that you might want to</div>
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activate in order to open the file. See the 3i support page for more information [2].</div>
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Best,</div>
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Sebastien</div>
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<div class="">[1] <a href="http://docs.openmicroscopy.org/bio-formats/5.7.3/formats/3i-slidebook.html" class="">http://docs.openmicroscopy.org/bio-formats/5.7.3/formats/3i-slidebook.html</a></div>
<div class="">[2] <a href="https://www.intelligent-imaging.com/technical-answers" class="">https://www.intelligent-imaging.com/technical-answers</a></div>
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<blockquote type="cite" class="">
<div class="">On 9 Feb 2018, at 16:15, Anthony, Neil <<a href="mailto:nantho2@emory.edu" class="">nantho2@emory.edu</a>> wrote:</div>
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<div class="">
<div id="divtagdefaultwrapper" dir="ltr" style="font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12pt; font-family: Calibri, Helvetica, sans-serif;" class="">
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Hi all, I hope the data treats you well.</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class="">
</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">I can't seem to get my slidebook file open with BF in Fiji. I get the below error. I've added Bioformats to my update site list and made sure all is up to date. I'll also post this to the ImageJ
list too, in case I have the wrong direction.</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Here is the sld file for reference:</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><a href="https://www.amazon.com/clouddrive/share/WBCXFTxSfyR4w2087RexdSYa8RJ8Eteg0S8q1lWfH3a" class="OWAAutoLink">https://www.amazon.com/clouddrive/share/WBCXFTxSfyR4w2087RexdSYa8RJ8Eteg0S8q1lWfH3a</a></div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Any pointers are much appreciated. Please let me know if you need anything further from me to figure things out.</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Thanks</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Neil</div>
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<div class="">(Fiji Is Just) ImageJ 2.0.0-rc-65/1.51s; Java 1.8.0_66 [64-bit]; Windows 10 10.0; 263MB of 392934MB (<1%)<br class="">
<br class="">
java.lang.ArrayIndexOutOfBoundsException: 0<br class="">
at loci.formats.in.SlidebookReader.initFile(SlidebookReader.java:558)<br class="">
at loci.formats.FormatReader.setId(FormatReader.java:1397)<br class="">
at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:499)<br class="">
at loci.plugins.in.ImportProcess.execute(ImportProcess.java:142)<br class="">
at loci.plugins.in.Importer.showDialogs(Importer.java:140)<br class="">
at loci.plugins.in.Importer.run(Importer.java:76)<br class="">
at loci.plugins.LociImporter.run(LociImporter.java:78)<br class="">
at ij.IJ.runUserPlugIn(IJ.java:221)<br class="">
at ij.IJ.runPlugIn(IJ.java:185)<br class="">
at ij.Executer.runCommand(Executer.java:137)<br class="">
at ij.Executer.run(Executer.java:66)<br class="">
at java.lang.Thread.run(Thread.java:745)<br class="">
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