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<font face="Calibri">Hi Will,<br>
<br>
thanks so much for your quick response!<br>
<br>
The files are beeing created on a DeltaVision OMX Blaze in SI mode
for super resolution using the OMX software on a windows machine.
<br>
<br>
Using Softworx, the super-resolution image is reconstructed from
the raw data and then the different channels are aligned.<br>
<br>
With this procedure, I end up with several files, for example:<br>
</font>
<ol>
<li><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001.dv</font></li>
<li><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001.log</font></li>
<li><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001_SIR.dv</font></li>
<li><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001_SIR_ALX.dv</font></li>
<li><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001_SIR_ALX_log.txt</font></li>
<li><font face="Calibri"><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001_SIR_log.txt</font></font></li>
<li><font face="Calibri"><font face="Calibri">20150601_Beadswell4_4ch_1516_SI_001_task.sh.joblog</font></font></li>
</ol>
<font face="Calibri"><font face="Calibri"></font>here, SIR =
reconstructed image, and<br>
ALX= camera alignment done<br>
<br>
If there is anything else you need, don't hesitate to ask.<br>
<br>
Cheers,<br>
Kai<br>
<br>
<br>
</font><br>
<div class="moz-cite-prefix">On 02.06.2015 09:05, William Moore
wrote:<br>
</div>
<blockquote
cite="mid:%3C428FB50D-9F37-4EB1-97BC-2A5916CA22BF@lifesci.dundee.ac.uk%3E"
type="cite">
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charset=windows-1252">
Hi Kai,
<div><br>
</div>
<div>In order for additional files to be included as part of an
image import, they need to be recognised by Bio-Formats as
"companion files" that are associated with that image.</div>
<div><br>
</div>
<div>In the case of Deltavision images, Bio-Formats should
automatically recognise any acquisition and deconvolution log
files that are generated by Softworx.</div>
<div>If you're finding that this is not happening for you, please
let us know the names of the files and how they are being
created.</div>
<div><br>
</div>
<div> Regards,</div>
<div><br>
</div>
<div> Will.</div>
<div><br>
</div>
<div><br>
<div>
<div>On 2 Jun 2015, at 07:48, Kai Schleicher <<a
moz-do-not-send="true"
href="mailto:kai.schleicher@unibas.ch">kai.schleicher@unibas.ch</a>>
wrote:</div>
<br class="Apple-interchange-newline">
<blockquote type="cite">
<div bgcolor="#FFFFFF" text="#000000"> <font face="Calibri">Hi,<br>
<br>
Is it possible to automatically attach a *.txt file of
the same name as the image file to the image during
upload?<br>
This *.txt </font><font face="Calibri">file could for
example be a log file that's automatically generated
during aquisition when using Softworx.<br>
<br>
Thanks and cheers,<br>
Kai<br>
</font>
<pre class="moz-signature" cols="72">--
Kai Schleicher, PhD | Postdoctoral Fellow in Light Microscopy | Biozentrum, University of Basel | Klingelbergstrasse 50/70 | CH-4056 Basel
Phone: +41 61 267 22 50 | <a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="mailto:kai.schleicher@unibas.ch">kai.schleicher@unibas.ch</a> | <a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="http://www.biozentrum.unibas.ch/">www.biozentrum.unibas.ch</a> | <a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="http://www.microscopynetwork.unibas.ch/">www.microscopynetwork.unibas.ch</a></pre>
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<br>
<pre class="moz-signature" cols="72">--
Kai Schleicher, PhD | Postdoctoral Fellow in Light Microscopy | Biozentrum, University of Basel | Klingelbergstrasse 50/70 | CH-4056 Basel
Phone: +41 61 267 22 50 | <a class="moz-txt-link-abbreviated" href="mailto:kai.schleicher@unibas.ch">kai.schleicher@unibas.ch</a> | <a class="moz-txt-link-abbreviated" href="http://www.biozentrum.unibas.ch">www.biozentrum.unibas.ch</a> | <a class="moz-txt-link-abbreviated" href="http://www.microscopynetwork.unibas.ch">www.microscopynetwork.unibas.ch</a></pre>
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