<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi Chris<div><br><div>The transform is a part of the ROI support that we have not updated and is out of synch with model.</div><div>According to the model, it should be a matrix, but currently it is a string (svg legacy), a place to look at it to see how we read them and transform them</div><div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; color: rgb(63, 127, 95); ">is org.openmicroscopy.shoola.util.roi.io.util.SVGTransform </div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; color: rgb(63, 127, 95); "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; color: rgb(63, 127, 95); ">We were hoping to find time over the summer to update that part of the code, but did not get a chance.</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; color: rgb(63, 127, 95); "><br></div><div><blockquote type="cite"><div lang="EN-US" link="blue" vlink="purple"><div class="WordSection1"><div style="margin-top: 0in; margin-right: 0in; margin-bottom: 0.0001pt; margin-left: 0in; font-size: 11pt; font-family: Calibri, sans-serif; "><span style="color: rgb(31, 73, 125); ">I am considering doing some measurements with the ROIs – is there a recommend way to get the pixel values from inside the ROI?</span></div></div></div></blockquote><div><br></div>To read the pixels, you can have a look at the classes under <span class="Apple-style-span" style="color: rgb(63, 127, 95); font-family: Monaco; font-size: 11px; ">org.openmicroscopy.shoola.env.rnd.roi</span></div><div><font class="Apple-style-span" color="#3F7F5F" face="Monaco" size="3"><span class="Apple-style-span" style="font-size: 11px;">We will be working on that code later in the year to support larger images and large ROIs. (very large ROIs can lead to OOM exception)</span></font></div><div><font class="Apple-style-span" color="#3F7F5F" face="Monaco" size="3"><span class="Apple-style-span" style="font-size: 11px;"><br></span></font></div><div><font class="Apple-style-span" color="#3F7F5F" face="Monaco" size="3"><span class="Apple-style-span" style="font-size: 11px;"><br></span></font></div><div><font class="Apple-style-span" color="#3F7F5F" face="Monaco" size="3"><span class="Apple-style-span" style="font-size: 11px;">Jmarie</span></font></div></div></div></body></html>