Hi Frans,<br><br>Sorry for the delay in reply.<br><br>This problem is certainly a bug in Bio-Formats rather than OMERO. I tested in the latest Bio-Formats trunk build and the problem seems to be fixed, so it will likely be working in the forthcoming release of OMERO Beta 4.0.0.<br>
<br>-Curtis<br><br><div class="gmail_quote">On Mon, Feb 9, 2009 at 4:46 AM, Cornelissen, Frans [PRDBE] <span dir="ltr"><<a href="mailto:FCORNELI@its.jnj.com">FCORNELI@its.jnj.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Hi,<br>
<br>
I'm trying to import JPEG 2000 files in OMERO 3.2<br>
It fails with the follwong message:<br>
Any ideas/fixes?<br>
<br>
Tx, Regards, frans<br>
<br>
java.lang.NullPointerException<br>
at<br>
loci.formats.codec.JPEG2000Codec.decompress(JPEG2000Codec.java:255)<br>
at loci.formats.in.ND2Reader.openBytes(ND2Reader.java:129)<br>
at loci.formats.ImageReader.openBytes(ImageReader.java:374)<br>
at loci.formats.ChannelFiller.openBytes(ChannelFiller.java:165)<br>
at loci.formats.ChannelFiller.openBytes(ChannelFiller.java:110)<br>
at<br>
loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:131)<br>
at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:204)<br>
at<br>
loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:253)<br>
at<br>
loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:245)<br>
at<br>
loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:229)<br>
at<br>
ome.formats.importer.OMEROWrapper.openPlane2D(OMEROWrapper.java:84)<br>
at<br>
ome.formats.importer.ImportLibrary.importData(ImportLibrary.java:507)<br>
at<br>
ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:432)<br>
at<br>
ome.formats.importer.ImportHandler.importImages(ImportHandler.java:178)<br>
at<br>
ome.formats.importer.ImportHandler.access$0(ImportHandler.java:107)<br>
at<br>
ome.formats.importer.ImportHandler$1.run(ImportHandler.java:88)<br>
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<br></blockquote></div><br>