[ome-devel] Exception during import

Matthias Dunda Matthias.Dunda at carus-it.com
Mon Feb 11 10:01:30 GMT 2008


Hi everybody!

When importing "single-channel.ome.tif" (which is a sample image from the LOCI website) I get the following exception:

Not searching for other files - Image LSID not present
java.lang.NullPointerException
        at loci.formats.MetadataTools.convertMetadata(MetadataTools.java:182)
        at loci.formats.MetadataTools.convertMetadata(MetadataTools.java:170)
        at loci.formats.in.OMETiffReader.initMetadataStore(OMETiffReader.java:247)
        at loci.formats.in.BaseTiffReader.initMetadata(BaseTiffReader.java:158)
        at loci.formats.in.BaseTiffReader.initFile(BaseTiffReader.java:813)
        at loci.formats.FormatReader.setId(FormatReader.java:605)
        at loci.formats.FormatHandler.setId(FormatHandler.java:146)
        at loci.formats.ImageReader.setId(ImageReader.java:536)
        at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:71)
        at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:71)
        at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:62)
        at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:71)
        at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:177)
        at de.carus.nautilus.OmeroTools.storeImage(OmeroTools.java:99)
        at tools.Basic.main(Basic.java:26)

None of the LOCI sample works with this.

Although, jpegs from my digicam do work... :-/  Can anybody tell me what's the problem here?

Thanks,
Matthias

--
Matthias Dunda, Dipl.-Inform.
c.a.r.u.s. HMS GmbH
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